5VOL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, IPA enzyme
Primary referenceBiochemical and Structural Analyses of Two Cryptic Esterases in Bacteroides intestinalis and their Synergistic Activities with Cognate Xylanases., Wefers D, Cavalcante JJV, Schendel RR, Deveryshetty J, Wang K, Wawrzak Z, Mackie RI, Koropatkin NM, Cann I, J Mol Biol. 2017 Aug 4;429(16):2509-2527. doi: 10.1016/j.jmb.2017.06.017. Epub, 2017 Jun 29. PMID:28669823
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (375 Kb) [Save to disk]
  • Biological Unit Coordinates (5vol.pdb1.gz) 189 Kb
  • Biological Unit Coordinates (5vol.pdb2.gz) 183 Kb
  • LPC: Ligand-Protein Contacts for 5VOL
  • CSU: Contacts of Structural Units for 5VOL
  • Structure Factors (5762 Kb)
  • Retrieve 5VOL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VOL from S2C, [Save to disk]
  • Re-refined 5vol structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VOL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vol_A] [5vol_B] [5vol_C] [5vol_D] [5vol_E] [5vol_F] [5vol_G] [5vol_H]
  • SWISS-PROT database:

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