5VTA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9K4, EDO, NAG, PEG, PG4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C, D
  • virus receptor activity
  • chemorepellent activity


    • Primary referenceStructure-guided Discovery of Dual-recognition Chemibodies., Cheng AC, Doherty EM, Johnstone S, DiMauro EF, Dao J, Luthra A, Ye J, Tang J, Nixey T, Min X, Tagari P, Miranda LP, Wang Z, Sci Rep. 2018 May 15;8(1):7570. doi: 10.1038/s41598-018-25848-0. PMID:29765112
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (682 Kb) [Save to disk]
  • Biological Unit Coordinates (5vta.pdb1.gz) 160 Kb
  • Biological Unit Coordinates (5vta.pdb2.gz) 159 Kb
  • Biological Unit Coordinates (5vta.pdb3.gz) 192 Kb
  • Biological Unit Coordinates (5vta.pdb4.gz) 193 Kb
  • LPC: Ligand-Protein Contacts for 5VTA
  • CSU: Contacts of Structural Units for 5VTA
  • Structure Factors (6593 Kb)
  • Retrieve 5VTA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VTA from S2C, [Save to disk]
    • View 5VTA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vta_A] [5vta_B] [5vta_C] [5vta_D] [5vta_E] [5vta_F] [5vta_G] [5vta_H] [5vta_I] [5vta_J] [5vta_K] [5vta_L]
  • SWISS-PROT database:

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