5VY9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AGS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, F, E, B


Primary referenceRatchet-like polypeptide translocation mechanism of the AAA+ disaggregase Hsp104., Gates SN, Yokom AL, Lin J, Jackrel ME, Rizo AN, Kendsersky NM, Buell CE, Sweeny EA, Mack KL, Chuang E, Torrente MP, Su M, Shorter J, Southworth DR, Science. 2017 Jul 21;357(6348):273-279. doi: 10.1126/science.aan1052. Epub 2017, Jun 15. PMID:28619716
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (654 Kb) [Save to disk]
  • Biological Unit Coordinates (5vy9.pdb1.gz) 645 Kb
  • LPC: Ligand-Protein Contacts for 5VY9
  • CSU: Contacts of Structural Units for 5VY9
  • Retrieve 5VY9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VY9 from S2C, [Save to disk]
  • View 5VY9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vy9_A] [5vy9_B] [5vy9_C] [5vy9_D] [5vy9_E] [5vy9_F] [5vy9_P]
  • SWISS-PROT database:

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