5W2L Dna Binding Protein date Jun 06, 2017
title Structure Of A Central Domain Of Human Ctc1
authors C.Rice, E.Skordalakes
compound source
Molecule: Cst Complex Subunit Ctc1
Chain: A, B
Fragment: Unp Residues 716-880
Synonym: Telomerase Binding Protein, Conserved Telomere Mai Component 1, Hbv Dnaptp1-Transactivated Protein B;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctc1, C17orf68
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.209 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.537 50.776 144.538 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.86 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural and functional analysis of an OB-fold in human Ctc1 implicated in telomere maintenance and bone marrow syndromes., Shastrula PK, Rice CT, Wang Z, Lieberman PM, Skordalakes E, Nucleic Acids Res. 2017 Dec 8. pii: 4708259. doi: 10.1093/nar/gkx1213. PMID:29228254
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (5w2l.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (5w2l.pdb2.gz) 25 Kb
  • CSU: Contacts of Structural Units for 5W2L
  • Structure Factors (270 Kb)
  • Retrieve 5W2L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5W2L from S2C, [Save to disk]
  • View 5W2L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5W2L
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5w2l from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5w2l_B] [5w2l_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5W2L
  • Community annotation for 5W2L at PDBWiki (http://pdbwiki.org)

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