5WBS Signaling Protein date Jun 29, 2017
title Crystal Structure Of Frizzled-7 Crd With An Inhibitor Peptid
authors A.H.Nile, S.Mukund, R.N.Hannoush, W.Wang
compound source
Molecule: Frizzled-7,Inhibitor Peptide Fz7-21
Chain: A, B, C, D, E, F, G, H
Synonym: Hfz7,Fze3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fzd7
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1 21 1
R_factor 0.199 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.610 164.650 97.770 90.00 108.31 90.00
method X-Ray Diffractionresolution 2.88 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceA selective peptide inhibitor of Frizzled 7 receptors disrupts intestinal stem cells., Nile AH, de Sousa E Melo F, Mukund S, Piskol R, Hansen S, Zhou L, Zhang Y, Fu Y, Gogol EB, Komuves LG, Modrusan Z, Angers S, Franke Y, Koth C, Fairbrother WJ, Wang W, de Sauvage FJ, Hannoush RN, Nat Chem Biol. 2018 Apr 9. pii: 10.1038/s41589-018-0035-2. doi:, 10.1038/s41589-018-0035-2. PMID:29632413
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (365 Kb) [Save to disk]
  • Biological Unit Coordinates (5wbs.pdb1.gz) 91 Kb
  • Biological Unit Coordinates (5wbs.pdb2.gz) 91 Kb
  • Biological Unit Coordinates (5wbs.pdb3.gz) 92 Kb
  • Biological Unit Coordinates (5wbs.pdb4.gz) 92 Kb
  • CSU: Contacts of Structural Units for 5WBS
  • Structure Factors (1089 Kb)
  • Retrieve 5WBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WBS from S2C, [Save to disk]
    • View 5WBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5WBS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wbs_H] [5wbs_G] [5wbs_D] [5wbs_E] [5wbs_A] [5wbs_F] [5wbs_C] [5wbs_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5WBS
  • Community annotation for 5WBS at PDBWiki (http://pdbwiki.org)

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