5WCH	Hydrolase	date	Jun 30, 2017
title	Crystal Structure Of The Catalytic Domain Of Human Usp9x
authors	A.Dong, Q.Zhang, J.R.Walker, C.Bountra, C.H.Arrowsmith, A.M.Edwar Y.Tong, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Probable Ubiquitin Carboxyl-Terminal Hydrolase Fa Chain: A, B, C, D Fragment: Residues 1551-1970 Synonym: Deubiquitinating Enzyme Faf-X,Fat Facets In Mammal Facets Protein-Related,X-Linked,Ubiquitin Thioesterase Faf- Ubiquitin-Specific Protease 9,X Chromosome,Ubiquitin-Specif Processing Protease Faf-X; Ec: 3.4.19.12 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Usp9x, Dffrx, Fam, Usp9 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21-Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-Mhl
symmetry	Space Group: P 1 21 1	R_factor 0.207 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 79.372 79.048 131.933 90.00 103.76 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	UNX, ZN	enzyme	Hydrolase E.C.3.4.19.12 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Crystal structure and activity-based labeling reveal the mechanisms for linkage-specific substrate recognition by deubiquitinase USP9X., Paudel P, Zhang Q, Leung C, Greenberg HC, Guo Y, Chern YH, Dong A, Li Y, Vedadi M, Zhuang Z, Tong Y, Proc Natl Acad Sci U S A. 2019 Mar 26. pii: 1815027116. doi:, 10.1073/pnas.1815027116. PMID:30914461

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (222 Kb) [Save to disk] Biological Unit Coordinates (5wch.pdb1.gz) 215 Kb LPC: Ligand-Protein Contacts for 5WCH CSU: Contacts of Structural Units for 5WCH Structure Factors (2147 Kb) Retrieve 5WCH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5WCH from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5wch_A] [5wch_B] [5wch_C] [5wch_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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