5WI9 Structural Protein date Jul 18, 2017
title Crystal Structure Of Kl With An Agonist Fab
authors S.Johnstone, X.Min, Z.Wang
compound source
Molecule: Beta-Klotho
Chain: A, B
Synonym: Betaklotho,Klotho Beta-Like Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Klb
Expression_system: Baculovirus Expression Vector Pfastbac1-
Expression_system_taxid: 274590

Molecule: 39f7 Fab Light Chain
Chain: L, E
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: 39f7 Fab Heavy Chain
Chain: H, F
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.216 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.018 68.465 147.811 90.00 111.86 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand EDO, NAG, PG4, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk]
  • Biological Unit Coordinates (5wi9.pdb1.gz) 137 Kb
  • Biological Unit Coordinates (5wi9.pdb2.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 5WI9
  • CSU: Contacts of Structural Units for 5WI9
  • Structure Factors (2581 Kb)
  • Retrieve 5WI9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WI9 from S2C, [Save to disk]
  • View 5WI9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5WI9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wi9_B] [5wi9_E] [5wi9_F] [5wi9_L] [5wi9_A] [5wi9_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5WI9
  • Community annotation for 5WI9 at PDBWiki (http://pdbwiki.org)

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