5X5M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 7YU, DMS enzyme
Primary referenceGyrI-like proteins catalyze cyclopropanoid hydrolysis to confer cellular protection., Yuan H, Zhang J, Cai Y, Wu S, Yang K, Chan HCS, Huang W, Jin WB, Li Y, Yin Y, Igarashi Y, Yuan S, Zhou J, Tang GL, Nat Commun. 2017 Nov 14;8(1):1485. doi: 10.1038/s41467-017-01508-1. PMID:29133784
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (5x5m.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (5x5m.pdb2.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 5X5M
  • CSU: Contacts of Structural Units for 5X5M
  • Structure Factors (1125 Kb)
  • Retrieve 5X5M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5X5M from S2C, [Save to disk]
  • View 5X5M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5x5m_A] [5x5m_B]
  • SWISS-PROT database:

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