5X6D	Dna Binding Proten Dna	date	Feb 21, 2017
title	Crystal Structure Of Prfa-Dna Binary Complex
authors	Y.Wang, H.Feng, Y.L.Zhu, P.Gao
compound		source
Molecule: Listeriolysin Positive Regulatory Factor A Chain: A, B, G, H, M, N Synonym: Listeriolysin Positive Regulatory Protein,Listerio Regulatory Protein,Pleitrophic Regulatory Factor A,Positive Regulatory Factor A,Prfa,Transcriptional Regulator; Engineered: Yes		Organism_scientific: Listeria Monocytogenes Organism_taxid: 1639 Gene: Prfa, Ajl40_05990, Ajn46_04535, M643_11230 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (29-Mer) Chain: C, K, P Engineered: Yes		Synthetic: Yes Organism_scientific: Listeria Monocytogenes Organism_taxid: 1639
Molecule: Dna (28-Mer) Chain: D, L, O Engineered: Yes		Synthetic: Yes Organism_scientific: Listeria Monocytogenes Organism_taxid: 1639
symmetry	Space Group: P 21 21 21	R_factor 0.213 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.820 96.443 371.911 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.94 Å
Gene	AJL40 ; AJN46 ; M643
Gene Ontology	Chain Function Process Component H, A, M, N, G, B
Primary reference	Structural insights into glutathione-mediated activation of the master regulator PrfA in Listeria monocytogenes., Wang Y, Feng H, Zhu Y, Gao P, Protein Cell. 2017 Apr;8(4):308-312. doi: 10.1007/s13238-017-0390-x. PMID:28271443

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (652 Kb) [Save to disk] Biological Unit Coordinates (5x6d.pdb1.gz) 214 Kb Biological Unit Coordinates (5x6d.pdb2.gz) 215 Kb Biological Unit Coordinates (5x6d.pdb3.gz) 215 Kb CSU: Contacts of Structural Units for 5X6D Structure Factors (443 Kb) Retrieve 5X6D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5X6D from S2C, [Save to disk] Re-refined 5x6d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5X6D

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5x6d_B] [5x6d_L] [5x6d_C] [5x6d_A] [5x6d_H] [5x6d_M] [5x6d] [5x6d_K] [5x6d_P] [5x6d_G] [5x6d_N] [5x6d_O] [5x6d_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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