5X6E	Crystal structure of PrfA-DNA binary complex	date
authors	Wang, Y., Feng, H., Zhu, Y.L., Gao, P.
compound		source
symmetry		R_factor R_Free 0.2997
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.99
ligand	GSH	enzyme
Gene	AJL40 ; AJN46 ; M643
Gene Ontology	Chain Function Process Component F, A, M, N, E, B
Primary reference	Structural insights into glutathione-mediated activation of the master regulator PrfA in Listeria monocytogenes., Wang Y, Feng H, Zhu Y, Gao P, Protein Cell. 2017 Apr;8(4):308-312. doi: 10.1007/s13238-017-0390-x. PMID:28271443

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (315 Kb) [Save to disk] Biological Unit Coordinates (5x6e.pdb1.gz) 104 Kb Biological Unit Coordinates (5x6e.pdb2.gz) 106 Kb Biological Unit Coordinates (5x6e.pdb3.gz) 105 Kb LPC: Ligand-Protein Contacts for 5X6E CSU: Contacts of Structural Units for 5X6E Structure Factors (741 Kb) Retrieve 5X6E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5X6E from S2C, [Save to disk] Re-refined 5x6e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5X6E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5X6E

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5x6e_H] [5x6e_M] [5x6e_N] [5x6e_D] [5x6e] [5x6e_G] [5x6e_F] [5x6e_P] [5x6e_C] [5x6e_E] [5x6e_A] [5x6e_O] [5x6e_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5X6E

Community annotation for 5X6E at PDBWiki (http://pdbwiki.org)

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