5XJV Hydrolase date May 04, 2017
title Two Intermediate States Of Conformation Switch In Dual Speci Phosphatase 13a
authors C.H.Wei, H.G.Min, H.J.Chun, S.E.Ryu
compound source
Molecule: Dual Specificity Protein Phosphatase 13 Isoform A
Chain: A, B
Fragment: Unp Residues 1-185
Synonym: Dusp13a,Branching-Enzyme Interacting Dsp,Muscle-Re Dsp,Mdsp;
Ec: 3.1.3.16,3.1.3.48
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dusp13, Bedp, Dusp13a, Mdsp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.178 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.037 89.343 45.897 90.00 89.88 90.00
method X-Ray Diffractionresolution 1.69 Å
ligand PO4 enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • protein tyrosine phosphatase...


    • Primary referenceTwo intermediate states of the conformational switch in dual specificity phosphatase 13a., Wei CH, Min HG, Kim M, Kim GH, Chun HJ, Ryu SE, Pharmacol Res. 2018 Feb;128:211-219. doi: 10.1016/j.phrs.2017.10.006. Epub 2017, Oct 27. PMID:29106959
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (5xjv.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (5xjv.pdb2.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 5XJV
  • CSU: Contacts of Structural Units for 5XJV
  • Structure Factors (969 Kb)
  • Retrieve 5XJV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XJV from S2C, [Save to disk]
    • View 5XJV in 3D
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    • Visual 3D analysis of 5XJV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xjv_B] [5xjv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5XJV
  • Community annotation for 5XJV at PDBWiki (http://pdbwiki.org)

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