5XPX Hydrolase date Jun 05, 2017
title Structure Elucidation Of Truncated Ams3 Lipase From An Antar Pseudomonas
authors R.N.Z.R.A.Rahman, W.Latip
compound source
Molecule: Lipase
Chain: A, E
Ec: 3.1.1.3
Engineered: Yes
Organism_scientific: Pseudomonas Sp. A3(2015c)
Organism_taxid: 1680634
Strain: 2015c
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 21 21 21
R_factor 0.222 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.753 94.693 126.431 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.77 Å
ligand CA, ZN enzyme Hydrolase E.C.3.1.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, E


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]
  • Biological Unit Coordinates (5xpx.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 5XPX
  • CSU: Contacts of Structural Units for 5XPX
  • Structure Factors (798 Kb)
  • Retrieve 5XPX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XPX from S2C, [Save to disk]
  • View 5XPX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5XPX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xpx_E] [5xpx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5XPX
  • Community annotation for 5XPX at PDBWiki (http://pdbwiki.org)

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