5XVU Transferase date Jun 28, 2017
title Crystal Structure Of The Protein Kinase Ck2 Catalytic Domain Plasmodium Falciparum Bound To Atp
authors A.El Sahili, J.Lescar, D.Ruiz-Carrillo, J.Q.Lin
compound source
Molecule: Casein Kinase 2, Alpha Subunit
Chain: A, B, C
Fragment: Unp Residues 12-335
Synonym: Casein Kinase II,Alpha Subunit,Putative
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7
Gene: Pf11_0096, Pf3d7_1108400
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.172 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.410 123.550 125.650 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand ATP, CL, EDO, PEG, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (344 Kb) [Save to disk]
  • Biological Unit Coordinates (5xvu.pdb1.gz) 115 Kb
  • Biological Unit Coordinates (5xvu.pdb2.gz) 115 Kb
  • Biological Unit Coordinates (5xvu.pdb3.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 5XVU
  • CSU: Contacts of Structural Units for 5XVU
  • Structure Factors (293 Kb)
  • Retrieve 5XVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XVU from S2C, [Save to disk]
  • Re-refined 5xvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5XVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5XVU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xvu_A] [5xvu_B] [5xvu_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5XVU
  • Community annotation for 5XVU at PDBWiki (http://pdbwiki.org)

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