5YFP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A exocyst B exocyst C exocyst D exocyst E exocyst F exocyst G exocyst H exocyst
Primary reference	Cryo-EM structure of the exocyst complex., Mei K, Li Y, Wang S, Shao G, Wang J, Ding Y, Luo G, Yue P, Liu JJ, Wang X, Dong MQ, Wang HW, Guo W, Nat Struct Mol Biol. 2018 Jan 15. pii: 10.1038/s41594-017-0016-2. doi:, 10.1038/s41594-017-0016-2. PMID:29335562

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (636 Kb) [Save to disk] Biological Unit Coordinates (5yfp.pdb1.gz) 602 Kb CSU: Contacts of Structural Units for 5YFP Retrieve 5YFP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YFP from S2C, [Save to disk]

View 5YFP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yfp_A] [5yfp_B] [5yfp_C] [5yfp_D] [5yfp_E] [5yfp_F] [5yfp_G] [5yfp_H] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---