5YRV		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5AD, B12, CA, CL, K, PGO	enzyme
Gene Ontology	Chain Function Process Component J, D, A, G
Primary reference	Direct Participation of a Peripheral Side Chain of a Corrin Ring in Coenzyme B12 Catalysis., Shibata N, Sueyoshi Y, Higuchi Y, Toraya T, Angew Chem Int Ed Engl. 2018 Jun 25;57(26):7830-7835. doi:, 10.1002/anie.201803591. Epub 2018 May 25. PMID:29797764

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1169 Kb) [Save to disk] Biological Unit Coordinates (5yrv.pdb1.gz) 583 Kb Biological Unit Coordinates (5yrv.pdb2.gz) 582 Kb LPC: Ligand-Protein Contacts for 5YRV CSU: Contacts of Structural Units for 5YRV Structure Factors (14414 Kb) Retrieve 5YRV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YRV from S2C, [Save to disk]

View 5YRV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yrv_A] [5yrv_B] [5yrv_C] [5yrv_D] [5yrv_E] [5yrv_F] [5yrv_G] [5yrv_H] [5yrv_I] [5yrv_J] [5yrv_K] [5yrv_L] SWISS-PROT database:

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