5YS2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceTwo classes of protective antibodies against Pseudorabies virus variant glycoprotein B: Implications for vaccine design., Li X, Yang F, Hu X, Tan F, Qi J, Peng R, Wang M, Chai Y, Hao L, Deng J, Bai C, Wang J, Song H, Tan S, Lu G, Gao GF, Shi Y, Tian K, PLoS Pathog. 2017 Dec 20;13(12):e1006777. doi: 10.1371/journal.ppat.1006777., eCollection 2017 Dec. PMID:29261802
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (338 Kb) [Save to disk]
  • Biological Unit Coordinates (5ys2.pdb1.gz) 168 Kb
  • Biological Unit Coordinates (5ys2.pdb2.gz) 166 Kb
  • CSU: Contacts of Structural Units for 5YS2
  • Structure Factors (575 Kb)
  • Retrieve 5YS2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YS2 from S2C, [Save to disk]
    • View 5YS2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ys2_A] [5ys2_B] [5ys2_C] [5ys2_D] [5ys2_E] [5ys2_F]
  • SWISS-PROT database:

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