5YYL		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	94R, NAG	enzyme
Primary reference	Architecture of the native major royal jelly protein 1 oligomer., Tian W, Li M, Guo H, Peng W, Xue X, Hu Y, Liu Y, Zhao Y, Fang X, Wang K, Li X, Tong Y, Conlon MA, Wu W, Ren F, Chen Z, Nat Commun. 2018 Aug 22;9(1):3373. doi: 10.1038/s41467-018-05619-1. PMID:30135511

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk] Biological Unit Coordinates (5yyl.pdb1.gz) 259 Kb LPC: Ligand-Protein Contacts for 5YYL CSU: Contacts of Structural Units for 5YYL Structure Factors (394 Kb) Retrieve 5YYL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YYL from S2C, [Save to disk]

View 5YYL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yyl_A] [5yyl_B] [5yyl_C] [5yyl_D] SWISS-PROT database:

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