5ZXD Translation date May 18, 2018
title Crystal Structure Of Atp-Bound Human Abcf1
authors L.Qu, Y.Jiang, Z.J.Liu
compound source
Molecule: Atp-Binding Cassette Sub-Family F Member 1
Chain: A, B
Fragment: Unp Residues 300-841
Synonym: Atp-Binding Cassette 50,Tnf-Alpha-Stimulated Abc P
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Abcf1, Abc50
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 21 21 21
R_factor 0.194 R_Free 0.224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.068 132.814 148.329 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.29 Å
ligand ATP, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of ATP-Bound Human ABCF1 Demonstrates a Unique Conformation of ABC Proteins., Qu L, Jiang Y, Cheng C, Wu D, Meng B, Chen Z, Zhu Y, Shaw N, Ouyang S, Liu ZJ, Structure. 2018 Jun 12. pii: S0969-2126(18)30206-5. doi:, 10.1016/j.str.2018.05.019. PMID:30017566
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (340 Kb) [Save to disk]
  • Biological Unit Coordinates (5zxd.pdb1.gz) 163 Kb
  • Biological Unit Coordinates (5zxd.pdb2.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 5ZXD
  • CSU: Contacts of Structural Units for 5ZXD
  • Structure Factors (2135 Kb)
  • Retrieve 5ZXD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZXD from S2C, [Save to disk]
  • View 5ZXD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ZXD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zxd_B] [5zxd_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ZXD
  • Community annotation for 5ZXD at PDBWiki (http://pdbwiki.org)

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