5HVO Transferase date Jan 28, 2016
title Structure Of Aspergillus Fumigatus Trehalose-6-Phosphate Syn Complex With Udp And Validoxylamine A
authors Y.Miao, R.G.Brennan
compound source
Molecule: Alpha,Alpha-Trehalose-Phosphate Synthase (Udp-For
Chain: A, B, C, D
Synonym: Trehalose-6-Phosphate Synthase
Engineered: Yes
Organism_scientific: Neosartorya Fumigata (Strain Atcc Mya- Af293 Cbs 101355 Fgsc A1100);
Organism_taxid: 330879
Strain: Atcc Mya-4609 Af293 Cbs 101355 Fgsc A1100
Gene: Afua_2g04010
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 2 21 21
R_factor 0.200 R_Free 0.236
length a length b length c angle alpha angle beta angle gamma
88.276 130.581 184.813 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.47 Å
ligand UDP, VDM enzyme Transferase E.C. BRENDA
A, D, C, B

Primary referenceStructural and In Vivo Studies on Trehalose-6-Phosphate Synthase from Pathogenic Fungi Provide Insights into Its Catalytic Mechanism, Biological Necessity, and Potential for Novel Antifungal Drug Design., Miao Y, Tenor JL, Toffaletti DL, Maskarinec SA, Liu J, Lee RE, Perfect JR, Brennan RG, MBio. 2017 Jul 25;8(4). pii: e00643-17. doi: 10.1128/mBio.00643-17. PMID:28743811
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (313 Kb) [Save to disk]
  • Biological Unit Coordinates (5hvo.pdb1.gz) 155 Kb
  • Biological Unit Coordinates (5hvo.pdb2.gz) 155 Kb
  • Biological Unit Coordinates (5hvo.pdb3.gz) 306 Kb
  • Biological Unit Coordinates (5hvo.pdb4.gz) 305 Kb
  • LPC: Ligand-Protein Contacts for 5HVO
  • CSU: Contacts of Structural Units for 5HVO
  • Structure Factors (580 Kb)
  • Retrieve 5HVO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HVO from S2C, [Save to disk]
  • Re-refined 5hvo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HVO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HVO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hvo_C] [5hvo_B] [5hvo] [5hvo_A] [5hvo_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HVO
  • Community annotation for 5HVO at PDBWiki (http://pdbwiki.org)

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