5HVO	Transferase	date	Jan 28, 2016
title	Structure Of Aspergillus Fumigatus Trehalose-6-Phosphate Syn Complex With Udp And Validoxylamine A
authors	Y.Miao, R.G.Brennan
compound		source
Molecule: Alpha,Alpha-Trehalose-Phosphate Synthase (Udp-For Chain: A, B, C, D Synonym: Trehalose-6-Phosphate Synthase Ec: 2.4.1.15 Engineered: Yes		Organism_scientific: Neosartorya Fumigata (Strain Atcc Mya- Af293 Cbs 101355 Fgsc A1100); Organism_taxid: 330879 Strain: Atcc Mya-4609 Af293 Cbs 101355 Fgsc A1100 Gene: Afua_2g04010 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 2 21 21	R_factor 0.200 R_Free 0.236
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.276 130.581 184.813 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.47 Å
ligand	UDP, VDM	enzyme	Transferase E.C.2.4.1.15 BRENDA
Gene	AFUA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural and In Vivo Studies on Trehalose-6-Phosphate Synthase from Pathogenic Fungi Provide Insights into Its Catalytic Mechanism, Biological Necessity, and Potential for Novel Antifungal Drug Design., Miao Y, Tenor JL, Toffaletti DL, Maskarinec SA, Liu J, Lee RE, Perfect JR, Brennan RG, MBio. 2017 Jul 25;8(4). pii: e00643-17. doi: 10.1128/mBio.00643-17. PMID:28743811

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (313 Kb) [Save to disk] Biological Unit Coordinates (5hvo.pdb1.gz) 155 Kb Biological Unit Coordinates (5hvo.pdb2.gz) 155 Kb Biological Unit Coordinates (5hvo.pdb3.gz) 306 Kb Biological Unit Coordinates (5hvo.pdb4.gz) 305 Kb LPC: Ligand-Protein Contacts for 5HVO CSU: Contacts of Structural Units for 5HVO Structure Factors (580 Kb) Retrieve 5HVO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HVO from S2C, [Save to disk] Re-refined 5hvo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HVO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5HVO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hvo_C] [5hvo_B] [5hvo] [5hvo_A] [5hvo_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5HVO

Community annotation for 5HVO at PDBWiki (http://pdbwiki.org)

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