6AX1 Hydrolase Hydrolase Inhibitor date Sep 06, 2017
title Structure Of Human Monoacylglycerol Lipase Bound To A Covale Inhibitor
authors J.Pandit
compound source
Molecule: Monoglyceride Lipase
Chain: A, B
Synonym: Mgl,Hu-K5,Lysophospholipase Homolog,Lysophospholip Monoacylglycerol Lipase,Magl;
Ec: 3.1.1.23
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mgll
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta
symmetry Space Group: I 2 2 2
R_factor 0.163 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.360 126.900 137.510 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
ligand C0S, GOL enzyme Hydrolase E.C.3.1.1.23 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAzetidine and Piperidine Carbamates as Efficient, Covalent Inhibitors of Monoacylglycerol Lipase., Butler CR, Beck EM, Harris A, Huang Z, McAllister LA, Am Ende CW, Fennell K, Foley TL, Fonseca K, Hawrylik SJ, Johnson DS, Knafels JD, Mente S, Noell GS, Pandit J, Phillips TB, Piro JR, Rogers BN, Samad TA, Wang J, Wan S, Brodney MA, J Med Chem. 2017 Dec 14;60(23):9860-9873. doi: 10.1021/acs.jmedchem.7b01531. Epub, 2017 Dec 5. PMID:29148769
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (197 Kb) [Save to disk]
  • Biological Unit Coordinates (6ax1.pdb1.gz) 95 Kb
  • Biological Unit Coordinates (6ax1.pdb2.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 6AX1
  • CSU: Contacts of Structural Units for 6AX1
  • Structure Factors (1199 Kb)
  • Retrieve 6AX1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AX1 from S2C, [Save to disk]
    • View 6AX1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6AX1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ax1_B] [6ax1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6AX1
  • Community annotation for 6AX1 at PDBWiki (http://pdbwiki.org)

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