6B8J Transferase Transferase Inhibitor date Oct 08, 2017
title Co-Structure Of Human Glycogen Synthase Kinase Beta With A S (5-Imidazol-2-Yl-4-Phenylpyrimidin-2-Yl)[2-(2-Pyridylamino) Ethyl]Amine Inhibitor
authors D.E.Bussiere
compound source
Molecule: Glycogen Synthase Kinase-3 Beta
Chain: A
Synonym: Gsk-3 Beta,Serinethreonine-Protein Kinase Gsk3b
Ec: 2.7.11.26,2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsk3b
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Val-Sep-Arg-Arg
Chain: C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.212 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.747 65.070 57.336 90.00 100.53 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand 65C, GOL, PTR, SEP enzyme Transferase E.C.2.7.11.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein serine/threonine kin...
  • excitatory postsynaptic pote...
  • positive regulation of mitoc...
  • beta-catenin destruction com...
  • Primary referenceSynthesis, Binding Mode, and Antihyperglycemic Activity of Potent and Selective (5-Imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine Inhibitors of Glycogen Synthase Kinase 3., Wagman AS, Boyce RS, Brown SP, Fang E, Goff D, Jansen JM, Le VP, Levine BH, Ng SC, Ni ZJ, Nuss JM, Pfister KB, Ramurthy S, Renhowe PA, Ring DB, Shu W, Subramanian S, Zhou XA, Shafer CM, Harrison SD, Johnson KW, Bussiere DE, J Med Chem. 2017 Oct 26;60(20):8482-8514. doi: 10.1021/acs.jmedchem.7b00922. Epub, 2017 Oct 10. PMID:29016121
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]
  • Biological Unit Coordinates (6b8j.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 6B8J
  • CSU: Contacts of Structural Units for 6B8J
  • Structure Factors (122 Kb)
  • Retrieve 6B8J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B8J from S2C, [Save to disk]
  • View 6B8J in 3D
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  • Visual 3D analysis of 6B8J
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b8j_A] [6b8j_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6B8J
  • Community annotation for 6B8J at PDBWiki (http://pdbwiki.org)

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