6BNL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, QWV enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, B


Primary referenceDual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity., Chennamadhavuni D, Saavedra-Avila NA, Carreno LJ, Guberman-Pfeffer MJ, Arora P, Yongqing T, Koay HF, Godfrey DI, Keshipeddy S, Richardson SK, Sundararaj S, Lo JH, Wen X, Gascon JA, Yuan W, Rossjohn J, Le Nours J, Porcelli SA, Howell AR, Cell Chem Biol. 2018 Mar 9. pii: S2451-9456(18)30073-4. doi:, 10.1016/j.chembiol.2018.02.009. PMID:29576533
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (524 Kb) [Save to disk]
  • Biological Unit Coordinates (6bnl.pdb1.gz) 261 Kb
  • Biological Unit Coordinates (6bnl.pdb2.gz) 260 Kb
  • LPC: Ligand-Protein Contacts for 6BNL
  • CSU: Contacts of Structural Units for 6BNL
  • Structure Factors (3306 Kb)
  • Retrieve 6BNL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BNL from S2C, [Save to disk]
  • View 6BNL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bnl_A] [6bnl_B] [6bnl_C] [6bnl_D] [6bnl_E] [6bnl_F] [6bnl_G] [6bnl_H]
  • SWISS-PROT database:

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