6BRL Ligase date Nov 30, 2017
title Crystal Structure Of A Glutamate Trna Ligase From Elizabethk Meningosepticum Ccug26117 In Complex With Its Amino Acid
authors Seattle Structural Genomics Center For Infectious Disease (S
compound source
Molecule: Glutamate Trna Ligase
Chain: A
Engineered: Yes
 Organism_scientific: Elizabethkingia Meningoseptica
Organism_taxid: 238
Strain: Ccug 26117
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Elmea.01348.A.B1
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.260 111.890 130.170 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand EDO, GLU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (6brl.pdb1.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 6BRL
  • CSU: Contacts of Structural Units for 6BRL
  • Structure Factors (957 Kb)
  • Retrieve 6BRL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BRL from S2C, [Save to disk]
    • View 6BRL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6BRL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6brl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6BRL
  • Community annotation for 6BRL at PDBWiki (http://pdbwiki.org)

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