6CDD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4., Bodnar NO, Kim KH, Ji Z, Wales TE, Svetlov V, Nudler E, Engen JR, Walz T, Rapoport TA, Nat Struct Mol Biol. 2018 Jul;25(7):616-622. doi: 10.1038/s41594-018-0085-x. Epub, 2018 Jul 2. PMID:29967539

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (450 Kb) [Save to disk] Biological Unit Coordinates (6cdd.pdb1.gz) 224 Kb Biological Unit Coordinates (6cdd.pdb2.gz) 223 Kb LPC: Ligand-Protein Contacts for 6CDD CSU: Contacts of Structural Units for 6CDD Structure Factors (2964 Kb) Retrieve 6CDD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6CDD from S2C, [Save to disk]

View 6CDD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6cdd_A] [6cdd_B] SWISS-PROT database:

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