6EQT Dna Binding Protein date Oct 15, 2017
title Crystal Structure Of The Human Kinetochore Protein Cenp-N
authors S.Pentakota, I.R.Vetter, A.Petrovic, A.Musacchio
compound source
Molecule: Centromere Protein N
Chain: A, B
Synonym: Cenp-N,Interphase Centromere Complex Protein 32
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cenpn, C16orf60, Icen32, Bm-309
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pst50tr-Dhfrhis
symmetry Space Group: P 41
R_factor 0.206 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.300 87.300 81.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.74 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDecoding the centromeric nucleosome through CENP-N., Pentakota S, Zhou K, Smith C, Maffini S, Petrovic A, Morgan GP, Weir JR, Vetter IR, Musacchio A, Luger K, Elife. 2017 Dec 27;6. doi: 10.7554/eLife.33442. PMID:29280735
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (6eqt.pdb1.gz) 37 Kb
  • Biological Unit Coordinates (6eqt.pdb2.gz) 36 Kb
  • CSU: Contacts of Structural Units for 6EQT
  • Structure Factors (459 Kb)
  • Retrieve 6EQT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EQT from S2C, [Save to disk]
  • View 6EQT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EQT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6eqt_A] [6eqt_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EQT
  • Community annotation for 6EQT at PDBWiki (http://pdbwiki.org)

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