6EUA Signaling Protein date Oct 30, 2017
title The Fibrinogen-Like Domain Of Human Angptl3
authors E.I.Biterova, M.E.Esmaeeli, H.I.Alanen, M.Saaranen, L.W.Ruddock
compound source
Molecule: Angiopoietin-Related Protein 3
Chain: A, B, C
Synonym: Angiopoietin-5,Ang-5,Angiopoietin-Like Protein 3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Angptl3, Angpt5, Unq153pro179
Expression_system: Escherichia Coli
Expression_system_taxid: 1110693
Expression_system_strain: Mds42
symmetry Space Group: P 21 21 21
R_factor 0.194 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.050 63.650 169.430 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
Primary referenceStructures of Angptl3 and Angptl4, modulators of triglyceride levels and coronary artery disease., Biterova E, Esmaeeli M, Alanen HI, Saaranen M, Ruddock LW, Sci Rep. 2018 Apr 30;8(1):6752. doi: 10.1038/s41598-018-25237-7. PMID:29713054
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (6eua.pdb1.gz) 212 Kb
  • CSU: Contacts of Structural Units for 6EUA
  • Structure Factors (315 Kb)
  • Retrieve 6EUA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EUA from S2C, [Save to disk]
  • View 6EUA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EUA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6eua from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6eua_B] [6eua_A] [6eua_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EUA
  • Community annotation for 6EUA at PDBWiki (http://pdbwiki.org)

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