6FO1 Chaperone date Feb 05, 2018
title Human R2tp Subcomplex Containing 1 Ruvbl1-Ruvbl2 Hexamer Bou Rbd Domain From Rpap3.
authors F.Martino, H.Munoz-Hernandez, C.F.Rodriguez, L.H.Pearl, O.Llorca
compound source
Molecule: Ruvb-Like 1
Chain: A, B, C
Synonym: 49 Kda Tata Box-Binding Protein-Interacting Protei Tbp-Interacting Protein,54 Kda Erythrocyte Cytosolic Protei Ino80 Complex Subunit H,Nuclear Matrix Protein 238,Nmp 238, Tip49a,Tip60-Associated Protein 54-Alpha,Tap54-Alpha;
Ec: 3.6.4.12
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ruvbl1, Ino80h, Nmp238, Tip49, Tip49a
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ruvb-Like 2
Chain: D, E, F
Synonym: 48 Kda Tata Box-Binding Protein-Interacting Protei Tbp-Interacting Protein,51 Kda Erythrocyte Cytosolic Protei Ino80 Complex Subunit J,Repressing Pontin 52,Reptin 52,Tip4 Associated Protein 54-Beta,Tap54-Beta;
Ec: 3.6.4.12
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ruvbl2, Ino80j, Tip48, Tip49b, Cgi-46
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Rna Polymerase II-Associated Protein 3
Chain: G
Engineered: Yes
Other_details: Mtsankaielqlqvkqnaeelqdfmrdlenwekdikqkdmelrrqngvpeenlppirng Frkkkkgkakesskktreentknriksydyeawakldvdrildeldkddstheslsqes Seedgihvdsqkalvlkekgnkyfkqgkydeaidcytkgmdadpynpvlptnrasayfr Kkfavaesdcnlavalnrsytkaysrrgaarfalqkleeakkdyervlelepnnfeatn Lrkisqalaskensypkeadivikstegerkqieaqqnkqqaisekdrgngffkegkye Aiecytrgiaadganallpanramaylkiqkyeeaekdctqailldgsyskafarrgta Tflgklneakqdfetvlllepgnkqavtelskikkeliekghwddvfldstqrqnvvkp Dnpphpgstkplkkviieetgnliqtidvpdsttaaapennpinlanviaatgttskkn Sqddlfptsdtprakvlkieevsdtsslqpqaslkqdvcqsysekmpieieqkpaqfat Vlppipansfqlesdfrqlksspdmlyqylkqiepslypklfqknldpdvfnqivkilh Fyiekekpllifeilqrlselkrfdmavmfmsetekkiaralfnhidksglkdssveel

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rpap3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.57 Å
ligand
enzyme Hydrolase E.C.3.6.4.12 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • DNA helicase activity
  • transcription coactivator ac...
  • 5'-3' DNA helicase activity


  • F, D, E
  • DNA helicase activity
  • transcription corepressor ac...
  • 5'-3' DNA helicase activity


  • G


    Primary referenceRPAP3 provides a flexible scaffold for coupling HSP90 to the human R2TP co-chaperone complex., Martino F, Pal M, Munoz-Hernandez H, Rodriguez CF, Nunez-Ramirez R, Gil-Carton D, Degliesposti G, Skehel JM, Roe SM, Prodromou C, Pearl LH, Llorca O, Nat Commun. 2018 Apr 16;9(1):1501. doi: 10.1038/s41467-018-03942-1. PMID:29662061
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (296 Kb) [Save to disk]
  • Biological Unit Coordinates (6fo1.pdb1.gz) 284 Kb
  • CSU: Contacts of Structural Units for 6FO1
  • Retrieve 6FO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FO1 from S2C, [Save to disk]
  • View 6FO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6FO1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6fo1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fo1_C] [6fo1_G] [6fo1_F] [6fo1_E] [6fo1_A] [6fo1_D] [6fo1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6FO1
  • Community annotation for 6FO1 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science