6G28 Hydrolase date Mar 22, 2018
title Human [Protein Adp-Ribosylargenine] Hydrolase Arh1 In Comple Adp-Ribose
authors A.Ariza
compound source
Molecule: [Protein Adp-Ribosylarginine] Hydrolase
Chain: A
Synonym: Adp-Ribosylarginine Hydrolase,Adp-Ribose-L-Arginin Enzyme;
Ec: 3.2.2.19
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Adprh, Arh1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.145 R_Free 0.157
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.102 66.687 83.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.23 Å
ligand
enzyme Hydrolase E.C.3.2.2.19 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference(ADP-ribosyl)hydrolases: Structural Basis for Differential Substrate Recognition and Inhibition., Rack JGM, Ariza A, Drown BS, Henfrey C, Bartlett E, Shirai T, Hergenrother PJ, Ahel I, Cell Chem Biol. 2018 Nov 16. pii: S2451-9456(18)30389-1. doi:, 10.1016/j.chembiol.2018.11.001. PMID:30472116
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (6g28.pdb1.gz) 136 Kb
  • CSU: Contacts of Structural Units for 6G28
  • Structure Factors (4318 Kb)
  • Retrieve 6G28 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6G28 from S2C, [Save to disk]
  • View 6G28 in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6G28
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6g28 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6g28_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6G28
  • Community annotation for 6G28 at PDBWiki (http://pdbwiki.org)

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