6G57 Ligase date Mar 29, 2018
title Structure Of The H1 Domain Of Human Kctd8
authors D.M.Pinkas, J.C.Bufton, C.M.Strain-Damerell, M.Fairhead, N.A.Bur Brown, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, A.N.
compound source
Molecule: Btbpoz Domain-Containing Protein Kctd8
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kctd8
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta
symmetry Space Group: P 61 2 2
R_factor 0.295 R_Free 0.342
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.117 92.117 219.355 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (6g57.pdb1.gz) 110 Kb
  • CSU: Contacts of Structural Units for 6G57
  • Structure Factors (560 Kb)
  • Retrieve 6G57 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6G57 from S2C, [Save to disk]
  • View 6G57 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6G57
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6g57_B] [6g57_A] [6g57_D] [6g57_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6G57
  • Community annotation for 6G57 at PDBWiki (http://pdbwiki.org)

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