6GCD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5HC, CME enzyme
Primary referenceRecognition of modified cytosine variants by the DNA binding domain of methyl-directed endonuclease McrBC., Zagorskaite E, Manakova E, Sasnauskas G, FEBS Lett. 2018 Sep 8. doi: 10.1002/1873-3468.13244. PMID:30194838
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (6gcd.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 6GCD
  • CSU: Contacts of Structural Units for 6GCD
  • Structure Factors (1007 Kb)
  • Retrieve 6GCD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GCD from S2C, [Save to disk]
  • View 6GCD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gcd_A] [6gcd_B] [6gcd_C] [6gcd_D]
  • SWISS-PROT database:

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