6GL7 Signaling Protein date May 23, 2018
title Neurturin-Gfra2-Ret Extracellular Complex
authors J.M.Bigalke, S.Aibara, J.Sandmark, A.Amunts
compound source
Molecule: Neurturin
Chain: B, A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nrtn
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Gdnf Family Receptor Alpha-2
Chain: D, C
Synonym: Gfr-Alpha-2,Gdnf Receptor Beta,Gdnfr-Beta,Neurturi Alpha,Ntnr-Alpha,Ret Ligand 2,Tgf-Beta-Related Neurotrophic Receptor 2;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gfra2, Gdnfrb, Retl2, Trnr2
Expression_system: Cricetulus Griseus
Expression_system_taxid: 10029

Molecule: Proto-Oncogene Tyrosine-Protein Kinase Receptor R
Chain: F, E
Synonym: Cadherin Family Member 12,Proto-Oncogene C-Ret
Ec: 2.7.10.1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ret, Cdhf12, Cdhr16, Ptc, Ret51
Expression_system: Cricetulus Griseus
Expression_system_taxid: 10029
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.30 Å
ligand
enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
D, C
  • glial cell-derived neurotrop...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (477 Kb) [Save to disk]
  • Biological Unit Coordinates (6gl7.pdb1.gz) 469 Kb
  • CSU: Contacts of Structural Units for 6GL7
  • Retrieve 6GL7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GL7 from S2C, [Save to disk]
  • View 6GL7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6GL7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6gl7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gl7_E] [6gl7_D] [6gl7_B] [6gl7_A] [6gl7_F] [6gl7_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6GL7
  • Community annotation for 6GL7 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science