6GWJ Rna Binding Protein date Jun 25, 2018
title Human Osgep Lage3 Gon7 Complex
authors S.Missoury, D.Liger, D.Durand, B.Collinet, V.H.Tilbeurgh
compound source
Molecule: Ekckeops Complex Subunit Lage3
Chain: B
Synonym: L Antigen Family Member 3,Protein Eso-3,Protein It
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lage3, Dxs9879e, Eso3, Itba2
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ekckeops Complex Subunit Gon7
Chain: D
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gon7, C14orf142
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Probable Trna N6-Adenosine Threonylcarbamoyltrans
Chain: K
Synonym: N6-L-Threonylcarbamoyladenine Synthase,T(6)A Synth Sialoglycoprotein Endopeptidase,Hosgep,T(6)A37 Threonylcarbamoyladenosine Biosynthesis Protein Osgep,Trna Threonylcarbamoyladenosine Biosynthesis Protein Osgep;
Ec: 2.3.1.234
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Osgep, Gcpl1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43
R_factor 0.186 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.120 105.120 51.350 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand GOL, MG, PEG, TRS enzyme Transferase E.C.2.3.1.234 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


D


K


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (6gwj.pdb1.gz) 153 Kb
  • LPC: Ligand-Protein Contacts for 6GWJ
  • CSU: Contacts of Structural Units for 6GWJ
  • Structure Factors (399 Kb)
  • Retrieve 6GWJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GWJ from S2C, [Save to disk]
    • View 6GWJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6GWJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gwj_D] [6gwj_K] [6gwj_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6GWJ
  • Community annotation for 6GWJ at PDBWiki (http://pdbwiki.org)

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