6GXZ Chaperone date Jun 27, 2018
title Crystal Structure Of The Human Rpap3(Tpr2)-Pih1d1(Cs) Comple
authors J.Henri, M.Quinternet, X.Manival, M.E.Chagot, B.Charpentier, P.M
compound source
Molecule: Rna Polymerase II-Associated Protein 3
Chain: A, C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rpap3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Pih1 Domain-Containing Protein 1
Chain: D, E
Synonym: Nucleolar Protein 17 Homolog
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pih1d1, Nop17
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.223 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
135.980 42.440 112.710 90.00 98.25 90.00
method X-Ray Diffractionresolution 2.97 Å
ligand CA enzyme
Primary referenceDeep Structural Analysis of RPAP3 and PIH1D1, Two Components of the HSP90 Co-chaperone R2TP Complex., Henri J, Chagot ME, Bourguet M, Abel Y, Terral G, Maurizy C, Aigueperse C, Georgescauld F, Vandermoere F, Saint-Fort R, Behm-Ansmant I, Charpentier B, Pradet-Balade B, Verheggen C, Bertrand E, Meyer P, Cianferani S, Manival X, Quinternet M, Structure. 2018 Jul 18. pii: S0969-2126(18)30208-9. doi:, 10.1016/j.str.2018.06.002. PMID:30033218
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (6gxz.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (6gxz.pdb2.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 6GXZ
  • CSU: Contacts of Structural Units for 6GXZ
  • Structure Factors (279 Kb)
  • Retrieve 6GXZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GXZ from S2C, [Save to disk]
  • View 6GXZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6GXZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gxz_A] [6gxz_C] [6gxz_E] [6gxz_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6GXZ
  • Community annotation for 6GXZ at PDBWiki (http://pdbwiki.org)

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