6GY3 Transcription date Jun 28, 2018
title Crystal Structure Of C. Glutamicum Amtr Bound To Glna Operat
authors M.Sevvana, Y.A.Muller
compound source
Molecule: Amtr Protein
Chain: A, B
Engineered: Yes
Other_details: First 14 Residues Cleaved Off Due To Factor Protease Treatment Electron Density Allowed Tracing Of Resi 220 In Both Protomers;
 Organism_scientific: Corynebacterium Glutamicum
Organism_common: Brevibacterium Saccharolyticum
Organism_taxid: 1718
Gene: Amtr
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmalc2

Molecule: Dna (5'- D(Gptpcptpaptpapgpaptpcpgpaptpapgpapc)-3'
Chain: C
Engineered: Yes
Synthetic: Yes
Organism_scientific: Corynebacterium Glutamicum
Organism_taxid: 1718

Molecule: Dna (5'- D(Gptpcptpaptpcpgpaptpcptpaptpapgpapc)-3'
Chain: D
Engineered: Yes
Synthetic: Yes
Organism_scientific: Corynebacterium Glutamicum
Organism_taxid: 1718
symmetry Space Group: P 21 21 21
R_factor 0.208 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.320 76.150 117.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.68 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (6gy3.pdb1.gz) 159 Kb
  • CSU: Contacts of Structural Units for 6GY3
  • Structure Factors (131 Kb)
  • Retrieve 6GY3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GY3 from S2C, [Save to disk]
    • View 6GY3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6GY3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gy3_C] [6gy3_A] [6gy3_D] [6gy3_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6GY3
  • Community annotation for 6GY3 at PDBWiki (http://pdbwiki.org)

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