6H6A Immune System date Jul 26, 2018
title Crystal Structure Of Unc119 In Complex With Lck Peptide
authors T.Yelland, Y.Elmaghloob, M.Mcilwraith, L.Stephen, S.Ismail
compound source
Molecule: Protein Unc-119 Homolog A
Chain: D
Synonym: Retinal Protein 4,Hrg4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Unc119, Rg4
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Gly-Cys-Gly-Cys-Ser-Ser
Chain: E, H, K
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606

Molecule: Protein Unc-119 Homolog A
Chain: G, J
Synonym: Retinal Protein 4,Hrg4
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Unc119, Rg4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.171 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.090 63.620 188.160 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 15P, GOL, MYR, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
J, D, G


Primary referenceThe Ciliary Machinery Is Repurposed for T Cell Immune Synapse Trafficking of LCK., Stephen LA, ElMaghloob Y, McIlwraith MJ, Yelland T, Castro Sanchez P, Roda-Navarro P, Ismail S, Dev Cell. 2018 Oct 8;47(1):122-132.e4. doi: 10.1016/j.devcel.2018.08.012. Epub, 2018 Sep 13. PMID:30220567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk]
  • Biological Unit Coordinates (6h6a.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (6h6a.pdb2.gz) 63 Kb
  • Biological Unit Coordinates (6h6a.pdb3.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 6H6A
  • CSU: Contacts of Structural Units for 6H6A
  • Structure Factors (1147 Kb)
  • Retrieve 6H6A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6H6A from S2C, [Save to disk]
  • View 6H6A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6H6A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6h6a_D] [6h6a_G] [6h6a_J] [6h6a_H] [6h6a_K] [6h6a_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6H6A
  • Community annotation for 6H6A at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science