6IDE	Transcription Dna	date	Sep 09, 2018
title	Crystal Structure Of The Vibrio Cholera Vqma-Ligand-Dna Comp Provides Molecular Mechanisms For Drug Design
authors	H.Wu, M.J.Li, H.J.Guo, H.Zhou, B.Li, Q.Xu, C.Y.Xu, F.Yu, J.H.He
compound		source
Molecule: Transcriptional Regulator Luxr Family Chain: A, B Fragment: Unp Residues 75-319 Engineered: Yes		Organism_scientific: Vibrio Cholerae Organism_taxid: 666 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'- D(Apgpgpgpgpgpgpapapaptpcpcpcpcpcpcpt)-3' Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Vibrio Cholerae Organism_taxid: 666
Molecule: Dna (5'- D(Apgpgpgpgpgpgpaptptptpcpcpcpcpcpcpt)-3' Chain: D Engineered: Yes		Synthetic: Yes Organism_scientific: Vibrio Cholerae Organism_taxid: 666
symmetry	Space Group: P 21 21 21	R_factor 0.192 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.780 108.980 214.320 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.51 Å
ligand	A1U	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of the Vibrio cholerae VqmA-ligand-DNA complex provides insight into ligand-binding mechanisms relevant for drug design., Wu H, Li M, Guo H, Zhou H, Li B, Xu Q, Xu C, Yu F, He J, J Biol Chem. 2019 Jan 4. pii: RA118.006082. doi: 10.1074/jbc.RA118.006082. PMID:30610119

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk] Biological Unit Coordinates (6ide.pdb1.gz) 180 Kb LPC: Ligand-Protein Contacts for 6IDE CSU: Contacts of Structural Units for 6IDE Structure Factors (1112 Kb) Retrieve 6IDE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6IDE from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ide_C] [6ide_A] [6ide_D] [6ide_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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