6ITF Virus date Nov 22, 2018
title Icosahedral Asymmetric Unit (Iasu) Model Of The Less Refined Part Of Fhv Eluted Particle
authors M.Banerjee, K.Azad
compound source
Molecule: Capsid Protein Beta
Chain: A, B, C
Synonym: Coat Protein Beta
Ec: 3.4.23.44
Engineered: Yes
Organism_scientific: Flock House Virus
Organism_common: Fhv
Organism_taxid: 12287
Gene: Alpha
Expression_system: Drosophila Melanogaster
Expression_system_taxid: 7227
Expression_system_cell_line: Dl-1
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.70 Å
ligand
enzyme Hydrolase E.C.3.4.23.44 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (6itf.pdb1.gz) 4097 Kb
  • CSU: Contacts of Structural Units for 6ITF
  • Retrieve 6ITF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ITF from S2C, [Save to disk]
  • View 6ITF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ITF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6itf_A] [6itf_C] [6itf_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ITF
  • Community annotation for 6ITF at PDBWiki (http://pdbwiki.org)

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