6JKG Oxidoreductase date Feb 28, 2019
title The Nad+-Free Form Of Human Nsdhl
authors D.Kim, S.J.Lee, B.Lee
compound source
Molecule: Sterol-4-Alpha-Carboxylate 3-Dehydrogenase, Decarboxylating;
Chain: A, B
Synonym: Protein H105e3
Ec: 1.1.1.170
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nsdhl, H105e3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.228 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.481 58.534 75.601 90.00 108.34 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand
enzyme Oxidoreductase E.C.1.1.1.170 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (6jkg.pdb1.gz) 67 Kb
  • CSU: Contacts of Structural Units for 6JKG
  • Structure Factors (237 Kb)
  • Retrieve 6JKG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6JKG from S2C, [Save to disk]
  • View 6JKG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6JKG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6jkg_A] [6jkg_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6JKG
  • Community annotation for 6JKG at PDBWiki (http://pdbwiki.org)

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