6JM5 Protein Transport date Mar 07, 2019
title Crystal Structure Of Tbc1d23 C Terminal Domain
authors Q.Sun, W.Huang
compound source
Molecule: Tbc1 Domain Family Member 23
Chain: A, B
Synonym: Hcv Non-Structural Protein 4a-Transactivated Prote
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tbc1d23, Ns4atp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.157 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
130.822 48.950 47.439 90.00 109.64 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (6jm5.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (6jm5.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 6JM5
  • CSU: Contacts of Structural Units for 6JM5
  • Structure Factors (530 Kb)
  • Retrieve 6JM5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6JM5 from S2C, [Save to disk]
  • View 6JM5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6JM5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6jm5_A] [6jm5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6JM5
  • Community annotation for 6JM5 at PDBWiki (http://pdbwiki.org)

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