6KE3 Oxidoreductase date Jul 03, 2019
title Crystal Structure Of The Alpha Bata Heterodimer Of Human Idh Complex With Nadh
authors P.Sun, J.Ding
compound source
Molecule: Isocitrate Dehydrogenase [Nad] Subunit Alpha, Mitochondrial;
Chain: A, C, E, G
Synonym: Isocitric Dehydrogenase Subunit Alpha,Nad(+)-Speci Subunit Alpha;
Ec: 1.1.1.41
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Idh3a
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Isocitrate Dehydrogenase [Nad] Subunit Beta, Mito
Chain: B, D, F, H
Synonym: Isocitric Dehydrogenase Subunit Beta,Nad(+)-Specif Subunit Beta;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Idh3b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.250 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.365 162.669 114.776 90.00 100.38 90.00
method X-Ray Diffractionresolution 3.31 Å
ligand NAI enzyme Oxidoreductase E.C.1.1.1.41 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, E, C, G


F, B, H, D


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (391 Kb) [Save to disk]
  • Biological Unit Coordinates (6ke3.pdb1.gz) 102 Kb
  • Biological Unit Coordinates (6ke3.pdb2.gz) 102 Kb
  • Biological Unit Coordinates (6ke3.pdb3.gz) 98 Kb
  • Biological Unit Coordinates (6ke3.pdb4.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 6KE3
  • CSU: Contacts of Structural Units for 6KE3
  • Structure Factors (1288 Kb)
  • Retrieve 6KE3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KE3 from S2C, [Save to disk]
    • View 6KE3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6KE3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ke3_H] [6ke3_D] [6ke3_B] [6ke3_A] [6ke3_E] [6ke3_G] [6ke3_C] [6ke3_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6KE3
  • Community annotation for 6KE3 at PDBWiki (http://pdbwiki.org)

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