6LHM	Oxidoreductase	date	Dec 09, 2019
title	Structure Of Human Pycr2
authors	N.Baburajendran
compound		source
Molecule: Pyrroline-5-Carboxylate Reductase 2 Chain: A, B, C, D, E Synonym: P5cr 2 Ec: 1.5.1.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pycr2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 2 21	R_factor 0.329 R_Free 0.360
crystal cell	length a length b length c angle alpha angle beta angle gamma 101.903 110.312 155.465 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.40 Å
ligand		enzyme	Oxidoreductase E.C.1.5.1.2 BRENDA
Primary reference	Loss of PYCR2 Causes Neurodegeneration by Increasing Cerebral Glycine Levels via SHMT2., Escande-Beillard N, Loh A, Saleem SN, Kanata K, Hashimoto Y, Altunoglu U, Metoska A, Grandjean J, Ng FM, Pomp O, Baburajendran N, Wong J, Hill J, Beillard E, Cozzone P, Zaki M, Kayserili H, Hamada H, Shiratori H, Reversade B, Neuron. 2020 Jul 8;107(1):82-94.e6. doi: 10.1016/j.neuron.2020.03.028. Epub 2020 , Apr 23. PMID:32330411

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (385 Kb) [Save to disk] Biological Unit Coordinates (6lhm.pdb1.gz) 79 Kb Biological Unit Coordinates (6lhm.pdb2.gz) 80 Kb Biological Unit Coordinates (6lhm.pdb3.gz) 77 Kb Biological Unit Coordinates (6lhm.pdb4.gz) 82 Kb Biological Unit Coordinates (6lhm.pdb5.gz) 73 Kb CSU: Contacts of Structural Units for 6LHM Structure Factors (681 Kb) Retrieve 6LHM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6LHM from S2C, [Save to disk]

View 6LHM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6LHM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6lhm_E] [6lhm_B] [6lhm_D] [6lhm_A] [6lhm_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6LHM

Community annotation for 6LHM at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---