6LPF	Rna Binding Protein	date	Jan 10, 2020
title	The Crystal Structure Of Human Cytoplasmic Lrs
authors	R.J.Liu, T.Long, H.Li, J.Li, J.H.Zhao, J.Z.Lin, A.Palencia, M.Z.Wan S.Cusack, E.D.Wang
compound		source
Molecule: Leucine--Trna Ligase, Cytoplasmic Chain: A, B Synonym: Leucyl-Trna Synthetase,Leurs Ec: 6.1.1.4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lars, Kiaa1352 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.199 R_Free 0.242
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.217 94.684 680.055 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.49 Å
ligand	GOL, LSS, VRT	enzyme	Ligase E.C.6.1.1.4 BRENDA
Gene Ontology	Chain Function Process Component A, B aminoacyl-tRNA editing activ...
Primary reference	Molecular basis of the multifaceted functions of human leucyl-tRNA synthetase in protein synthesis and beyond., Liu RJ, Long T, Li H, Zhao J, Li J, Wang M, Palencia A, Lin J, Cusack S, Wang ED, Nucleic Acids Res. 2020 Mar 30. pii: 5813801. doi: 10.1093/nar/gkaa189. PMID:32232361

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (345 Kb) [Save to disk] Biological Unit Coordinates (6lpf.pdb1.gz) 166 Kb Biological Unit Coordinates (6lpf.pdb2.gz) 178 Kb LPC: Ligand-Protein Contacts for 6LPF CSU: Contacts of Structural Units for 6LPF Structure Factors (2734 Kb) Retrieve 6LPF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6LPF from S2C, [Save to disk]

View 6LPF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6LPF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6lpf_B] [6lpf_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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