6LTO Transport Protein date Jan 23, 2020
title Cryo-Em Structure Of Full Length Human Pannexin1
authors L.Q.Mou, M.Ke, Q.J.Xiao, J.P.Wu, D.Deng
compound source
Molecule: Pannexin-1
Chain: A, B, C, D, E, F, G
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Panx1, Mrs1, Unq2529pro6028
Expression_system: Insect Cell Expression Vector Ptie1
Expression_system_taxid: 266783
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.10 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, G, E, B


Primary referenceStructural basis for gating mechanism of Pannexin 1 channel., Mou L, Ke M, Song M, Shan Y, Xiao Q, Liu Q, Li J, Sun K, Pu L, Guo L, Geng J, Wu J, Deng D, Cell Res. 2020 May;30(5):452-454. doi: 10.1038/s41422-020-0313-x. Epub 2020 Apr, 13. PMID:32284561
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (319 Kb) [Save to disk]
  • Biological Unit Coordinates (6lto.pdb1.gz) 310 Kb
  • CSU: Contacts of Structural Units for 6LTO
  • Retrieve 6LTO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LTO from S2C, [Save to disk]
    • View 6LTO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6LTO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6lto_G] [6lto_F] [6lto_E] [6lto_C] [6lto_A] [6lto_B] [6lto_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6LTO
  • Community annotation for 6LTO at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science