6LXE Hydrolase Rna Binding Protein date Feb 10, 2020
title Drosha-Dgcr8 Complex
authors W.Jin, J.Wang, C.P.Liu, H.W.Wang, R.M.Xu
compound source
Molecule: Ribonuclease 3
Chain: A
Synonym: Protein Drosha,Ribonuclease III,Rnase III,P241
Ec: 3.1.26.3
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Drosha, Rn3, Rnase3l, Rnasen
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Microprocessor Complex Subunit Dgcr8
Chain: B, C
Synonym: Digeorge Syndrome Critical Region 8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dgcr8, C22orf12, Dgcrk6, Lp4941
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.20 Å
ligand ZN enzyme Hydrolase E.C.3.1.26.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


C, B
  • ribonuclease III activity


    • Primary referenceStructural Basis for pri-miRNA Recognition by Drosha., Jin W, Wang J, Liu CP, Wang HW, Xu RM, Mol Cell. 2020 Mar 25. pii: S1097-2765(20)30144-1. doi:, 10.1016/j.molcel.2020.02.024. PMID:32220645
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk]
  • Biological Unit Coordinates (6lxe.pdb1.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 6LXE
  • CSU: Contacts of Structural Units for 6LXE
  • Retrieve 6LXE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LXE from S2C, [Save to disk]
    • View 6LXE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6LXE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6lxe_B] [6lxe_A] [6lxe_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6LXE
  • Community annotation for 6LXE at PDBWiki (http://pdbwiki.org)

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