6MIZ Membrane Protein date Sep 20, 2018
title Human Trpm2 Ion Channel In An Adpr-Bound State
authors L.Wang, T.M.Fu, S.Xia, H.Wu
compound source
Molecule: Transient Receptor Potential Cation Channel Subfa Member 2;
Chain: A, B, C, D
Synonym: Estrogen-Responsive Element-Associated Gene 1 Prot Transient Receptor Potential Channel 2,Ltrpc2,Transient Rec Potential Channel 7,Trpc7,Transient Receptor Potential Mela
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trpm2, Ereg1, Knp3, Ltrpc2, Trpc7
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • sodium channel activity


  • Primary referenceStructures and gating mechanism of human TRPM2., Wang L, Fu TM, Zhou Y, Xia S, Greka A, Wu H, Science. 2018 Nov 22. pii: science.aav4809. doi: 10.1126/science.aav4809. PMID:30467180
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (784 Kb) [Save to disk]
  • Biological Unit Coordinates (6miz.pdb1.gz) 776 Kb
  • CSU: Contacts of Structural Units for 6MIZ
  • Retrieve 6MIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MIZ from S2C, [Save to disk]
  • View 6MIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MIZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6miz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6miz_C] [6miz_B] [6miz_A] [6miz_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MIZ
  • Community annotation for 6MIZ at PDBWiki (http://pdbwiki.org)

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