6N12 Structural Protein date Nov 08, 2018
title Structure Of Gtpase Domain Of Human Septin 7 At High Resolut
authors G.Brognara, H.M.Pereira, J.Brandao-Neto, A.P.U.Araujo, R.C.Garra
compound source
Molecule: Septin-7
Chain: A, B
Synonym: Cdc10 Protein Homolog
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sept7, Cdc10
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta
symmetry Space Group: P 61
R_factor 0.181 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.815 82.815 209.021 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.23 Å
ligand GDP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRevisiting SEPT7 and the slippage of beta-strands in the septin family., Brognara G, Pereira HM, Brandao-Neto J, Araujo APU, Garratt RC, J Struct Biol. 2019 Apr 19. pii: S1047-8477(19)30081-4. doi:, 10.1016/j.jsb.2019.04.015. PMID:31009756
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk]
  • Biological Unit Coordinates (6n12.pdb1.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 6N12
  • CSU: Contacts of Structural Units for 6N12
  • Structure Factors (1569 Kb)
  • Retrieve 6N12 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6N12 from S2C, [Save to disk]
    • View 6N12 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6N12
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6n12_A] [6n12_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6N12
  • Community annotation for 6N12 at PDBWiki (http://pdbwiki.org)

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