6NMA Unknown Function Rna date Jan 10, 2019
title Cryoem Structure Of The Lbcas12a-Crrna-Acrva4 Complex
authors L.Chang, Z.Li, H.Zhang
compound source
Molecule: Acrva1
Chain: A, C
Engineered: Yes
 Organism_scientific: Moraxella Bovoculi
Organism_taxid: 386891
Gene: Aax07_09545
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Cpf1
Chain: B
Engineered: Yes
Organism_scientific: Lachnospiraceae Bacterium Nd2006
Organism_taxid: 1410628
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Rna
Chain: G
Engineered: Yes
Synthetic: Yes
Organism_scientific: Lachnospiraceae Bacterium Nd2006
Organism_taxid: 1410628
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.38 Å
ligand MG enzyme
Primary referenceStructural Basis for the Inhibition of CRISPR-Cas12a by Anti-CRISPR Proteins., Zhang H, Li Z, Daczkowski CM, Gabel C, Mesecar AD, Chang L, Cell Host Microbe. 2019 May 27. pii: S1931-3128(19)30249-5. doi:, 10.1016/j.chom.2019.05.004. PMID:31155345
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]
  • Biological Unit Coordinates (6nma.pdb1.gz) 220 Kb
  • LPC: Ligand-Protein Contacts for 6NMA
  • CSU: Contacts of Structural Units for 6NMA
  • Retrieve 6NMA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NMA from S2C, [Save to disk]
    • View 6NMA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6NMA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6nma_G] [6nma_B] [6nma_A] [6nma_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6NMA
  • Community annotation for 6NMA at PDBWiki (http://pdbwiki.org)

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