6OD7		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component K, F, I, L, J, G, A, H, B, E, C, D
Primary reference	Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome., Liu YT, Jih J, Dai X, Bi GQ, Zhou ZH, Nature. 2019 Jun;570(7760):257-261. doi: 10.1038/s41586-019-1248-6. Epub 2019 May, 29. PMID:31142842

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (669 Kb) [Save to disk] Biological Unit Coordinates (6od7.pdb1.gz) 655 Kb CSU: Contacts of Structural Units for 6OD7 Retrieve 6OD7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6OD7 from S2C, [Save to disk]

View 6OD7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6od7_A] [6od7_B] [6od7_C] [6od7_D] [6od7_E] [6od7_F] [6od7_G] [6od7_H] [6od7_I] [6od7_J] [6od7_K] [6od7_L] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---