6OSV Immune Sytem Transferase date May 02, 2019
title Potent And Selective Antitumor Antibody Targeting A Membrane Epitope Of Ror2
authors H.Park, C.Rader
compound source
Molecule: Antibody Light Chain Variable Region
Chain: L
Engineered: Yes
Organism_scientific: Oryctolagus Cuniculus
Organism_taxid: 9986
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Tyrosine-Protein Kinase Transmembrane Receptor Ro
Chain: K
Synonym: Neurotrophic Tyrosine Kinase,Receptor-Related 2
Ec: 2.7.10.1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ror2, Ntrkr2
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Antibody Heavy Chain Variable Region
Chain: H
Engineered: Yes

Organism_scientific: Oryctolagus Cuniculus
Organism_taxid: 9986
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.162 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.109 60.105 102.756 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.34 Å
ligand
enzyme Transferase E.C.2.7.10.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (6osv.pdb1.gz) 151 Kb
  • CSU: Contacts of Structural Units for 6OSV
  • Structure Factors (1129 Kb)
  • Retrieve 6OSV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OSV from S2C, [Save to disk]
  • View 6OSV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OSV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6osv_L] [6osv_K] [6osv_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OSV
  • Community annotation for 6OSV at PDBWiki (http://pdbwiki.org)

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