6PQP Transport Protein date Jul 09, 2019
title Cryo-Em Structure Of The Human Trpa1 Ion Channel In Complex Covalent Agonist Bitc
authors Y.Suo, Z.Wang, L.Zubcevic, A.L.Hsu, Q.He, M.J.Borgnia, R.R.Ji, S.
compound source
Molecule: Transient Receptor Potential Cation Channel Subfa Member 1;
Chain: A, D, B, C
Synonym: Ankyrin-Like With Transmembrane Domains Protein 1, Transformation-Sensitive Protein P120;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trpa1, Anktm1
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.06 Å
ligand 6OU, 9BE, LBN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • calcium-release channel acti...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (384 Kb) [Save to disk]
  • Biological Unit Coordinates (6pqp.pdb1.gz) 365 Kb
  • LPC: Ligand-Protein Contacts for 6PQP
  • CSU: Contacts of Structural Units for 6PQP
  • Retrieve 6PQP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PQP from S2C, [Save to disk]
  • View 6PQP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6PQP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pqp_C] [6pqp_D] [6pqp_B] [6pqp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6PQP
  • Community annotation for 6PQP at PDBWiki (http://pdbwiki.org)

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